My Bibliography

select

Hoisington AJ, Choy K, Khair S, Dyamenahalli KU, Najarro KM, Wiktor AJ, Frank DN, Burnham EL, McMahan RH, Kovacs EJ. Recent alcohol intake impacts microbiota in adult burn patients. Alcohol. 2024 Apr 9;. doi: 10.1016/j.alcohol.2024.04.003. [Epub ahead of print] PubMed PMID: 38604285; NIHMSID:NIHMS1987281.

select

Sheridan RM, Doan T, Lucas C, Forward T, Martin A, Morrison TE, Hesselberth JR, Tamburini BA. A specific and portable gene expression program underlies antigen archiving by lymphatic endothelial cells. bioRxiv. 2024 April.

select

Doan TA, Forward TS, Schafer JB, Lucas ED, Fleming I, Uecker-Martin A, Ayala E, Guthmiller JJ, Hesselberth JR, Morrison TE, Tamburini BAJ. Immunization-induced antigen archiving enhances local memory CD8+ T cell responses following an unrelated viral infection. NPJ Vaccines. 2024 Mar 21;9(1):66. doi: 10.1038/s41541-024-00856-6. PubMed PMID: 38514656; PubMed Central PMCID: PMC10957963.

select

Kolakada D, Fu R, Biziaev N, Shuvalov A, Lore M, Campbell AE, Cortázar MA, Sajek MP, Hesselberth JR, Mukherjee N, Alkalaeva E, Jagannathan S. Peptidyl-tRNA hydrolysis rate influences the efficiency of nonsense-mediated mRNA decay. bioRxiv. 2024 Mar 9;. doi: 10.1101/2024.01.10.575080. PubMed PMID: 38260612; PubMed Central PMCID: PMC10802582.

select

Lucas CJ, Sheridan RM, Reynoso GV, Davenport BJ, McCarthy MK, Martin A, Hesselberth JR, Hickman HD, Tamburini BA, Morrison TE. Chikungunya virus infection disrupts lymph node lymphatic endothelial cell composition and function via MARCO. JCI Insight. 2024 Jan 9;9(4). doi: 10.1172/jci.insight.176537. PubMed PMID: 38194268.

select

Farmer T, Vaeth KF, Han KJ, Goering R, Taliaferro MJ, Prekeris R. The role of midbody-associated mRNAs in regulating abscission. J Cell Biol. 2023 Dec 4;222(12). doi: 10.1083/jcb.202306123. Epub 2023 Nov 3. PubMed PMID: 37922419; PubMed Central PMCID: PMC10624257.

select

Khair S, Walrath TM, Curtis BJ, Orlicky DJ, McMahan RH, Kovacs EJ. Ethanol exacerbates pulmonary complications after burn injury in mice, regardless of frequency of ethanol exposures. Burns. 2023 Dec;49(8):1935-1943. doi: 10.1016/j.burns.2023.07.008. Epub 2023 Jul 26. PubMed PMID: 37574341; PubMed Central PMCID: PMC10811296.

select

Diaz AV, Stephenson D, Nemkov T, D'Alessandro A, Reis T. Spenito-dependent metabolic sexual dimorphism intrinsic to fat storage cells. Genetics. 2023 Nov 1;225(3). doi: 10.1093/genetics/iyad164. PubMed PMID: 37738330; PubMed Central PMCID: PMC10627258.

select

Lucas CJ, Sheridan RM, Reynoso GV, Davenport BJ, McCarthy MK, Martin A, Hesselberth JR, Hickman HD, Tamburini BAJ, Morrison TE. Chikungunya virus infection disrupts lymph node lymphatic endothelial cell composition and function via MARCO. bioRxiv. 2023 Oct 13;. doi: 10.1101/2023.10.12.561615. PubMed PMID: 37873393; PubMed Central PMCID: PMC10592756.

select

Tran LN, Loew SK, Franco SJ. Notch Signaling Plays a Dual Role in Regulating the Neuron-to-Oligodendrocyte Switch in the Developing Dorsal Forebrain. J Neurosci. 2023 Oct 11;43(41):6854-6871. doi: 10.1523/JNEUROSCI.0144-23.2023. Epub 2023 Aug 28. PubMed PMID: 37640551; PubMed Central PMCID: PMC10573779.

select

Walrath T, Najarro KM, Giesy LE, Khair S, Frank DN, Robertson CE, Orlicky DJ, Quillinan N, Idrovo JP, McMahan RH, Kovacs EJ. REMOTE BURN INJURY IN AGED MICE INDUCES COLONIC LYMPHOID AGGREGATE EXPANSION AND DYSBIOSIS OF THE FECAL MICROBIOME WHICH CORRELATES WITH NEUROINFLAMMATION. Shock. 2023 Oct 1;60(4):585-593. doi: 10.1097/SHK.0000000000002202. Epub 2023 Aug 7. PubMed PMID: 37548929; PubMed Central PMCID: PMC10581426.

select

Tamburini B, Doan T, Forward T, Lucas E, Fleming I, Uecker-Martin A, Hesselberth J, Morrison T. Vaccine-induced antigen archiving enhances local memory CD8+ T cell responses following an unrelated viral infection. Res Sq. 2023 Sep 25;. doi: 10.21203/rs.3.rs-3307809/v1. PubMed PMID: 37841845; PubMed Central PMCID: PMC10571600.

select

Neumann AJ, Prekeris R. A Rab-bit hole: Rab40 GTPases as new regulators of the actin cytoskeleton and cell migration. Front Cell Dev Biol. 2023;11:1268922. doi: 10.3389/fcell.2023.1268922. eCollection 2023. Review. PubMed PMID: 37736498; PubMed Central PMCID: PMC10509765.

select

Ivanova DL, Thompson SB, Klarquist J, Harbell MG, Kilgore AM, Lasda EL, Hesselberth JR, Hunter CA, Kedl RM. Vaccine adjuvant-elicited CD8(+) T cell immunity is co-dependent on T-bet and FOXO1. Cell Rep. 2023 Aug 29;42(8):112911. doi: 10.1016/j.celrep.2023.112911. Epub 2023 Jul 29. PubMed PMID: 37516968; PubMed Central PMCID: PMC10577800.

select

Muñoz O, Lore M, Jagannathan S. The long and short of EJC-independent nonsense-mediated RNA decay. Biochem Soc Trans. 2023 Jun 28;51(3):1121-1129. doi: 10.1042/BST20221131. Review. PubMed PMID: 37145092.

select

White LK, Strugar SM, MacFadden A, Hesselberth JR. Nanopore sequencing of internal 2'-PO(4) modifications installed by RNA repair. RNA. 2023 Jun;29(6):847-861. doi: 10.1261/rna.079290.122. Epub 2023 Feb 28. PubMed PMID: 36854608; PubMed Central PMCID: PMC10187680.

select

Choy K, Dyamenahalli KU, Khair S, Colborn KL, Wiktor AJ, Idrovo JP, McMahan RH, Burnham EL, Kovacs EJ. Aberrant inflammatory responses in intoxicated burn-injured patients parallel impaired cognitive function. Alcohol. 2023 Jun;109:35-41. doi: 10.1016/j.alcohol.2023.01.002. Epub 2023 Jan 21. PubMed PMID: 36690221; PubMed Central PMCID: PMC10175175.

select

Wethekam LC, Moore JK. Tubulin isotype regulation maintains asymmetric requirement for α-tubulin over β-tubulin. J Cell Biol. 2023 Mar 6;222(3). doi: 10.1083/jcb.202202102. Epub 2023 Jan 31. PubMed PMID: 36719400; PubMed Central PMCID: PMC9930134.

select

Goering R, Arora A, Pockalny MC, Taliaferro JM. RNA localization mechanisms transcend cell morphology. Elife. 2023 Mar 3;12. doi: 10.7554/eLife.80040. PubMed PMID: 36867563; PubMed Central PMCID: PMC9984196.

select

Jewett CE, McCurdy BL, O'Toole ET, Stemm-Wolf AJ, Given KS, Lin CH, Olsen V, Martin W, Reinholdt L, Espinosa JM, Sullivan KD, Macklin WB, Prekeris R, Pearson CG. Trisomy 21 induces pericentrosomal crowding delaying primary ciliogenesis and mouse cerebellar development. Elife. 2023 Jan 19;12. doi: 10.7554/eLife.78202. PubMed PMID: 36656118; PubMed Central PMCID: PMC9851619.

select

Schafer JB, Lucas ED, Dzieciatkowska M, Forward T, Tamburini BAJ. Programmed death ligand 1 intracellular interactions with STAT3 and focal adhesion protein Paxillin facilitate lymphatic endothelial cell remodeling. J Biol Chem. 2022 Dec;298(12):102694. doi: 10.1016/j.jbc.2022.102694. Epub 2022 Nov 12. PubMed PMID: 36375639; PubMed Central PMCID: PMC9761386.

select

Hoff KJ, Neumann AJ, Moore JK. The molecular biology of tubulinopathies: Understanding the impact of variants on tubulin structure and microtubule regulation. Front Cell Neurosci. 2022;16:1023267. doi: 10.3389/fncel.2022.1023267. eCollection 2022. Review. PubMed PMID: 36406756; PubMed Central PMCID: PMC9666403.

select

White LK, Hesselberth JR. Modification mapping by nanopore sequencing. Front Genet. 2022;13:1037134. doi: 10.3389/fgene.2022.1037134. eCollection 2022. Review. PubMed PMID: 36386798; PubMed Central PMCID: PMC9650216.

select

Arora A, Castro-Gutierrez R, Moffatt C, Eletto D, Becker R, Brown M, Moor AE, Russ HA, Taliaferro JM. High-throughput identification of RNA localization elements in neuronal cells. Nucleic Acids Res. 2022 Oct 14;50(18):10626-10642. doi: 10.1093/nar/gkac763. PubMed PMID: 36107770; PubMed Central PMCID: PMC9561290.

select

Hussain A, Paukovich N, Henen MA, Vögeli B. Advances in the exact nuclear Overhauser effect 2018-2022. Methods. 2022 Oct;206:87-98. doi: 10.1016/j.ymeth.2022.08.006. Epub 2022 Aug 17. Review. PubMed PMID: 35985641; PubMed Central PMCID: PMC9596134.

select

McCurdy BL, Jewett CE, Stemm-Wolf AJ, Duc HN, Joshi M, Espinosa JM, Prekeris R, Pearson CG. Trisomy 21 increases microtubules and disrupts centriolar satellite localization. Mol Biol Cell. 2022 Jul 1;33(8). doi: 10.1091/mbc.E21-10-0517-T. Epub 2022 Apr 27. PubMed PMID: 35476505; PubMed Central PMCID: PMC9635274.

select

Hoff KJ, Aiken JE, Gutierrez MA, Franco SJ, Moore JK. TUBA1A tubulinopathy mutants disrupt neuron morphogenesis and override XMAP215/Stu2 regulation of microtubule dynamics. Elife. 2022 May 5;11. doi: 10.7554/eLife.76189. PubMed PMID: 35511030; PubMed Central PMCID: PMC9236607.

select

Lo HG, Engel KL, Goering R, Li Y, Spitale RC, Taliaferro JM. Halo-seq: An RNA Proximity Labeling Method for the Isolation and Analysis of Subcellular RNA Populations. Curr Protoc. 2022 May;2(5):e424. doi: 10.1002/cpz1.424. PubMed PMID: 35532287; PubMed Central PMCID: PMC9097300.

select

Duncan ED, Han KJ, Trout MA, Prekeris R. Ubiquitylation by Rab40b/Cul5 regulates Rap2 localization and activity during cell migration. J Cell Biol. 2022 Apr 4;221(4). doi: 10.1083/jcb.202107114. Epub 2022 Mar 16. PubMed PMID: 35293963; PubMed Central PMCID: PMC8931537.

select

Paukovich N, Henen MA, Hussain A, Issaian A, Sikela JM, Hansen KC, Vögeli B. Solution NMR backbone assignments of disordered Olduvai protein domain CON1 employing Hα-detected experiments. Biomol NMR Assign. 2022 Apr;16(1):113-119. doi: 10.1007/s12104-022-10068-5. Epub 2022 Jan 30. PubMed PMID: 35098449; PubMed Central PMCID: PMC9202364.

select

Engel KL, Lo HG, Goering R, Li Y, Spitale RC, Taliaferro JM. Analysis of subcellular transcriptomes by RNA proximity labeling with Halo-seq. Nucleic Acids Res. 2022 Feb 28;50(4):e24. doi: 10.1093/nar/gkab1185. PubMed PMID: 34875090; PubMed Central PMCID: PMC8887463.

select

Riemondy KA, Venkataraman S, Willard N, Nellan A, Sanford B, Griesinger AM, Amani V, Mitra S, Hankinson TC, Handler MH, Sill M, Ocasio J, Weir SJ, Malawsky DS, Gershon TR, Garancher A, Wechsler-Reya RJ, Hesselberth JR, Foreman NK, Donson AM, Vibhakar R. Neoplastic and immune single-cell transcriptomics define subgroup-specific intra-tumoral heterogeneity of childhood medulloblastoma. Neuro Oncol. 2022 Feb 1;24(2):273-286. doi: 10.1093/neuonc/noab135. PubMed PMID: 34077540; PubMed Central PMCID: PMC8804892.

select

Ramos SA, Morton JJ, Yadav P, Reed B, Alizadeh SI, Shilleh AH, Perrenoud L, Jaggers J, Kappler J, Jimeno A, Russ HA. Generation of functional human thymic cells from induced pluripotent stem cells. J Allergy Clin Immunol. 2022 Feb;149(2):767-781.e6. doi: 10.1016/j.jaci.2021.07.021. Epub 2021 Jul 29. PubMed PMID: 34331993; PubMed Central PMCID: PMC8815270.

select

Buscaglia G, Northington KR, Aiken J, Hoff KJ, Bates EA. Bridging the Gap: The Importance of TUBA1A α-Tubulin in Forming Midline Commissures. Front Cell Dev Biol. 2021;9:789438. doi: 10.3389/fcell.2021.789438. eCollection 2021. PubMed PMID: 35127710; PubMed Central PMCID: PMC8807549.

select

Arora A, Goering R, Lo HYG, Lo J, Moffatt C, Taliaferro JM. The Role of Alternative Polyadenylation in the Regulation of Subcellular RNA Localization. Front Genet. 2021;12:818668. doi: 10.3389/fgene.2021.818668. eCollection 2021. Review. PubMed PMID: 35096024; PubMed Central PMCID: PMC8795681.

select

Moore JK, Wethekam L. Specialist α-tubulins for pluralist microtubules. J Cell Biol. 2021 Dec 6;220(12). doi: 10.1083/jcb.202110038. Epub 2021 Nov 11. PubMed PMID: 34762120; PubMed Central PMCID: PMC8590278.

select

Park K, Hoff KJ, Wethekam L, Stence N, Saenz M, Moore JK. Kinetically Stabilizing Mutations in Beta Tubulins Create Isotype-Specific Brain Malformations. Front Cell Dev Biol. 2021;9:765992. doi: 10.3389/fcell.2021.765992. eCollection 2021. PubMed PMID: 34869359; PubMed Central PMCID: PMC8637541.

select

Carpentier KS, Sheridan RM, Lucas CJ, Davenport BJ, Li FS, Lucas ED, McCarthy MK, Reynoso GV, May NA, Tamburini BAJ, Hesselberth JR, Hickman HD, Morrison TE. MARCO(+) lymphatic endothelial cells sequester arthritogenic alphaviruses to limit viremia and viral dissemination. EMBO J. 2021 Nov 15;40(22):e108966. doi: 10.15252/embj.2021108966. Epub 2021 Oct 7. PubMed PMID: 34618370; PubMed Central PMCID: PMC8591538.

select

Armitage LH, Stimpson SE, Santostefano KE, Sui L, Ogundare S, Newby BN, Castro-Gutierrez R, Huber MK, Taylor JP, Sharma P, Radichev IA, Perry DJ, Fredette NC, Savinov AY, Wallet MA, Terada N, Brusko TM, Russ HA, Chen J, Egli D, Mathews CE. Use of Induced Pluripotent Stem Cells to Build Isogenic Systems and Investigate Type 1 Diabetes. Front Endocrinol (Lausanne). 2021;12:737276. doi: 10.3389/fendo.2021.737276. eCollection 2021. PubMed PMID: 34858326; PubMed Central PMCID: PMC8630743.

select

Carvill GL, Matheny T, Hesselberth J, Demarest S. Haploinsufficiency, Dominant Negative, and Gain-of-Function Mechanisms in Epilepsy: Matching Therapeutic Approach to the Pathophysiology. Neurotherapeutics. 2021 Jul;18(3):1500-1514. doi: 10.1007/s13311-021-01137-z. Epub 2021 Oct 14. Review. PubMed PMID: 34648141; PubMed Central PMCID: PMC8608973.

select

D'Alessandro A, Hay A, Dzieciatkowska M, Brown BC, Morrison EJ, Hansen KC, Zimring JC. Protein-L-isoaspartate O-methyltransferase is required for in vivo control of oxidative damage in red blood cells. Haematologica. 2021 Oct 1;106(10):2726-2739. doi: 10.3324/haematol.2020.266676. PubMed PMID: 33054131; PubMed Central PMCID: PMC8485689.

select

Denney AS, Weems AD, McMurray MA. Selective functional inhibition of a tumor-derived p53 mutant by cytosolic chaperones identified using split-YFP in budding yeast. G3 (Bethesda). 2021 Sep 6;11(9). doi: 10.1093/g3journal/jkab230. PubMed PMID: 34544131; PubMed Central PMCID: PMC8496213.

select

Hassell DS, Steingesser MG, Denney AS, Johnson CR, McMurray MA. Chemical rescue of mutant proteins in living Saccharomyces cerevisiae cells by naturally occurring small molecules. G3 (Bethesda). 2021 Sep 6;11(9). doi: 10.1093/g3journal/jkab252. PubMed PMID: 34544143; PubMed Central PMCID: PMC8496222.

select

Yeager R, Bushkin GG, Singer E, Fu R, Cooperman B, McMurray M. Post-Transcriptional Control of Mating-Type Gene Expression during Gametogenesis in Saccharomyces cerevisiae. Biomolecules. 2021 Aug 17;11(8). doi: 10.3390/biom11081223. PubMed PMID: 34439889; PubMed Central PMCID: PMC8394074.

select

Castro-Gutierrez R, Alkanani A, Mathews CE, Michels A, Russ HA. Protecting Stem Cell Derived Pancreatic Beta-Like Cells From Diabetogenic T Cell Recognition. Front Endocrinol (Lausanne). 2021;12:707881. doi: 10.3389/fendo.2021.707881. eCollection 2021. PubMed PMID: 34305820; PubMed Central PMCID: PMC8299417.

select

Linklater ES, Duncan ED, Han KJ, Kaupinis A, Valius M, Lyons TR, Prekeris R. Rab40-Cullin5 complex regulates EPLIN and actin cytoskeleton dynamics during cell migration. J Cell Biol. 2021 Jul 5;220(7). doi: 10.1083/jcb.202008060. Epub 2021 May 17. PubMed PMID: 33999101; PubMed Central PMCID: PMC8129794.

select

Gillette CM, Tennessen JM, Reis T. Balancing energy expenditure and storage with growth and biosynthesis during Drosophila development. Dev Biol. 2021 Jul;475:234-244. doi: 10.1016/j.ydbio.2021.01.019. Epub 2021 Feb 11. Review. PubMed PMID: 33582116; PubMed Central PMCID: PMC8543490.

select

Goering R, Engel KL, Gillen AE, Fong N, Bentley DL, Taliaferro JM. LABRAT reveals association of alternative polyadenylation with transcript localization, RNA binding protein expression, transcription speed, and cancer survival. BMC Genomics. 2021 Jun 26;22(1):476. doi: 10.1186/s12864-021-07781-1. PubMed PMID: 34174817; PubMed Central PMCID: PMC8234626.

select

Alba GA, Samokhin AO, Wang RS, Zhang YY, Wertheim BM, Arons E, Greenfield EA, Lundberg Slingsby MH, Ceglowski JR, Haley KJ, Bowman FP, Yu YR, Haney JC, Eng G, Mitchell RN, Sheets A, Vargas SO, Seo S, Channick RN, Leary PJ, Rajagopal S, Loscalzo J, Battinelli EM, Maron BA. NEDD9 Is a Novel and Modifiable Mediator of Platelet-Endothelial Adhesion in the Pulmonary Circulation. Am J Respir Crit Care Med. 2021 Jun 15;203(12):1533-1545. doi: 10.1164/rccm.202003-0719OC. PubMed PMID: 33523764; PubMed Central PMCID: PMC8483217.

select

Arora A, Goering R, Lo HG, Taliaferro MJ. Mechanical Fractionation of Cultured Neuronal Cells into Cell Body and Neurite Fractions. Bio Protoc. 2021 Jun 5;11(11):e4048. doi: 10.21769/BioProtoc.4048. eCollection 2021 Jun 5. PubMed PMID: 34250214; PubMed Central PMCID: PMC8250387.